Insertion junction: CLIP2.003705_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003705
Chromosome:chromosome 17
Location:532676
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g699450 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGCAGGCGCAGCACGGACGCATGGCAACCGGCCGCAGACTGCACGTTC
Internal bar code:GAAGACTTCTTCTCGGGTTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3622
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGTATTGCACGGAAGCG
Suggested primer 2:CAAGCGCCGGAATAAGTTGG