Insertion junction: CLIP2.003710_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003710
Chromosome:chromosome 12
Location:9768811
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g550702 TEF13 Predicted protein; (1 of 2) PTHR33222//PTHR33222:SF3 - FAMILY NOT NAMED // PROTEIN CURVATURE THYLAKOID 1C, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGACCTCGCGGCTCCTGGACAAGCAGTGCTACGTTCTGTGACATTTGC
Internal bar code:ATTGGTTTGGAATATCACCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3930
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GATCTGTGCAACGATGACGC
Suggested primer 2:GCCTTTTTGTAAGCGTGCCA