Insertion junction: CLIP2.003710_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003710
Chromosome:chromosome 12
Location:9768814
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g550702 TEF13 Predicted protein; (1 of 2) PTHR33222//PTHR33222:SF3 - FAMILY NOT NAMED // PROTEIN CURVATURE THYLAKOID 1C, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCGCGCGCTGATCGAGGCCGCATGTACCCAGCACCTTCCGACACACCC
Internal bar code:ACGAACATGACTTAAGTAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1640
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTTTTTGTAAGCGTGCCA
Suggested primer 2:GATCTGTGCAACGATGACGC