Insertion junction: CLIP2.003714_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.003714
Chromosome:chromosome 3
Location:7272108
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g207400 (1 of 1) PTHR36846:SF1 - PROTEIN VIAA outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTTGATCGATACGACGATAAGTATCATTGGAATGCCTGCGCATGTGAA
Internal bar code:GTACTCTCCAGTGGGGGGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1438
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:AATTCTGAGCAGGGCAGACC
Suggested primer 2:CTCCTGCTTCCATGCCTTCA