Insertion junction: CLIP2.003725_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003725
Chromosome:chromosome 7
Location:3503904
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336150 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCGGCTCACCTGGCGGCGGCACGTCCGATGCAGCAATAGCTGTACATG
Internal bar code:CTGTTACAATATGGTCGTCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1776
LEAP-Seq percent confirming:36.7647
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTCCACTGCGTTAACCTC
Suggested primer 2:CTTGCCAGTTGTTTGGGACG