Insertion junction: CLIP2.003739_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003739
Chromosome:chromosome 12
Location:2039150
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510400 RBD4,CPLD30 Conserved in the Plant Lineage and Diatoms; (1 of 4) IPR024934 - Rubredoxin-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCGGCACCAAGCCAGAACCAGCCAGCCGAGCCAGGCCCTGCCCAACGA
Internal bar code:ACTATTTCGATTAACTCCTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:865
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTCGAACCTGGCTCATC
Suggested primer 2:TAATCGCCAGAACAGCAGCA