Insertion junction: CLIP2.003742_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.003742
Chromosome:chromosome 3
Location:8555313
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210961 (1 of 1) PTHR10174:SF127 - PHOSPHATIDYLINOSITOL TRANSFER PROTEIN PDR16-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCGTGGTCGTACGCGTAGTTGGGCAGCGCGCCGCCCATGCACTGCTC
Internal bar code:TCCGGACATCAATTACCGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1450
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTGTGTGTGTGCTCACG
Suggested primer 2:CGAAGGAAGATACGAGCGCT