Insertion junction: CLIP2.003744_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003744
Chromosome:chromosome 13
Location:127019
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562750 CGLD38 Conserved in the Green Lineage and Diatoms; (1 of 1) PF14234 - Domain of unknown function (DUF4336) (DUF4336) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCCTCCGGCACTTGGCTGTGAGGCAGGGCCACGTGCACTCCCAGTGGG
Internal bar code:TTTCTACGATCTCGCGAGTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1173
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCCTTAATCCCCTCCTCA
Suggested primer 2:AGCACTCGACACTGTTGAGG