Insertion junction: CLIP2.003752_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003752
Chromosome:chromosome 5
Location:909199
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g246551 (1 of 1) IPR000104//IPR001810//IPR020683 - Antifreeze protein, type I // F-box domain // Ankyrin repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAGGTGAAACACCCACACGTGCCCCACACGTGCCCCACACGTGCCCTG
Internal bar code:CGTCCGTGCCCTTTGGTTCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1872
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTTCATTTGCTGGGATG
Suggested primer 2:ATCTACAACCCTCCCCCTCC