Insertion junction: CLIP2.003753_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.003753
Chromosome:chromosome 16
Location:3102061
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g664750 (1 of 1) IPR000225//IPR016024//IPR021133 - Armadillo // Armadillo-type fold // HEAT, type 2 3'UTR
Cre16.g664801 RBL4 rhomboid-like protease; (1 of 4) PTHR22936//PTHR22936:SF32 - RHOMBOID-RELATED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAACCCATCGTGAGCGAGGCCATCTATTCTGCTCTCGTGTGCCTCAAA
Internal bar code:TTAAGTAGTCGTTGGGTGCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2763
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGACGCCACATTACCACCAG
Suggested primer 2:GAGGACAAACACACCGTTGC