Insertion junction: CLIP2.003768_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003768
Chromosome:chromosome 17
Location:2878623
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g718900 FAP88 Flagellar Associated Protein 88; (1 of 1) PTHR23237//PTHR23237:SF6 - NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 // H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCCCAGATTGTTCACCTCCTTTTGCATCCTGGGGCGGGGAAGTGGGGT
Internal bar code:AAATTCTGGACTCTTTGTCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1036
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAGCTGAACGAGGTGAAG
Suggested primer 2:CCCCTCCCCCTATTCCTTGA