Insertion junction: CLIP2.003770_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003770
Chromosome:chromosome 6
Location:7719959
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g302650 RRM5 (1 of 2) 2.1.1.166 - 23S rRNA (uridine(2552)-2'-O)-methyltransferase / Um2552 methyltransferase; Putative ribosomal RNA methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCGCGCAGGTGCAGGATTGGAGGGACCGTCCGACCTGGCGGCAAGGCC
Internal bar code:TGGAAAGCTACATATATAAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1612
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAAGGGTGAAACACCTCG
Suggested primer 2:GTCAAGGTACGTGCAGGTCA