Insertion junction: CLIP2.003771_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003771
Chromosome:chromosome 10
Location:2251433
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g433900 (1 of 2) K10592 - E3 ubiquitin-protein ligase HUWE1 (HUWE1, MULE, ARF-BP1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCAACGGCCGCTACTTCCACGTCACCAACCTGTCCAACTGGTCCATGG
Internal bar code:TCAATTATGGGATAATTCGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3086
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCATATGCCTGGACGGA
Suggested primer 2:TGGGTGTACGGTCTTTGCTC