Insertion junction: CLIP2.003776_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.003776
Chromosome:chromosome 1
Location:4416093
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g030100 PTK13 Protein tyrosine kinase; (1 of 7) PTHR23257//PTHR23257:SF474 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCCGCACATCGAATGCAGGTCACACACACATTTGCATGCGCAGTGTC
Internal bar code:ATACCTAGGCATCTATGCAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1832
LEAP-Seq percent confirming:73.913
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTCCGTGTACCCATGT
Suggested primer 2:ATGGTTGTGAGCAGAGGGTG