Insertion junction: CLIP2.003786_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003786
Chromosome:chromosome 5
Location:809087
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g245900 BCA2 (1 of 1) PTHR11825//PTHR11825:SF46 - SUBGROUP IIII AMINOTRANSFERASE // BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 3, CHLOROPLASTIC; Branched-chain amino acid aminotransferase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTCAGAAGATGCAGTGTCGTGTGCGGTGGTGCGGAGCAGGCGACATAA
Internal bar code:AGGGGGAGTGATAAACACGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2449
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGATATGCTCCCGATTGC
Suggested primer 2:GCTCTGGAGATGTACTCGGC