Insertion junction: CLIP2.003799_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.003799
Chromosome:chromosome 17
Location:3242799
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721700 CPLD44 (1 of 3) PF13599 - Pentapeptide repeats (9 copies) (Pentapeptide_4); conserved expressed thylakoid lumenal protein-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTTCATTGGCGTTGCAATCAGTGCTCCCCTTTCGTTTGCGCCGTGCAG
Internal bar code:TCTAAGTGCACATCAACTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2646
LEAP-Seq percent confirming:87.8788
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GTACAGGCATGGTGTGAGCT
Suggested primer 2:ACGCATCACAACAAACCTGC