Insertion junction: CLIP2.003813_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003813
Chromosome:chromosome 12
Location:654645
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g493300 (1 of 6) PTHR10582 - TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGAGAGTGGGTGCAGGGCCGGTGTGGGCTGGTGTGGGCGAGTGTGGG
Internal bar code:AAAGCCGGCTTGATCGTGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:701
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCAGGTCGTCGTAGGAGA
Suggested primer 2:TCCTCACCAGCCCAACATTC