Insertion junction: CLIP2.003818_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003818
Chromosome:chromosome 2
Location:7827630
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g146300 (1 of 2) PTHR10027 - CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACCCGGACAGAGGCTACCAGGTGCGGCCCCACTTGTTGCGGCTCAAG
Internal bar code:GAGATAATGTAGCCTTGGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2881
LEAP-Seq percent confirming:92.4051
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGCATAGCCGGTATCAGC
Suggested primer 2:GCAGCTGGAGTTTGTGAAGC