Insertion junction: CLIP2.003824_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003824
Chromosome:chromosome 5
Location:2341413
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238322 TSW2 (1 of 2) 6.1.1.2 - Tryptophan--tRNA ligase / Tryptophanyl-tRNA synthetase; Putative tryptophanyl-tRNA synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCTGGCTGGTTGAGGGGGGCGATGTGTCGGTGTCAGTGGAACCAAGGG
Internal bar code:TATTAGCGACATCGATCTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1671
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAACGGATGGCTGAGGTG
Suggested primer 2:CCAACTCTTTCATAGCGCGC