Insertion junction: CLIP2.003824_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003824
Chromosome:chromosome 5
Location:2341414
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238322 TSW2 (1 of 2) 6.1.1.2 - Tryptophan--tRNA ligase / Tryptophanyl-tRNA synthetase; Putative tryptophanyl-tRNA synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGTCGGTACAGTAACCCCGGCGTTCGACCATCAGCGCCGACCCTCGC
Internal bar code:TATTAGCGACATCGATCTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4280
LEAP-Seq percent confirming:89.7436
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACTCTTTCATAGCGCGC
Suggested primer 2:AGAAACGGATGGCTGAGGTG