Insertion junction: CLIP2.003828_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.003828
Chromosome:chromosome 16
Location:5913076
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAGCCATATCACAATCACCGCGCCCAGAATCTCTGCCAGCACCATGAG
Internal bar code:TGGACGTACATTTACAGCTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2459
LEAP-Seq percent confirming:48.1481
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTAACGTGACACAAGCGA
Suggested primer 2:GTGTGCGTTTCCAACAGCAT