Insertion junction: CLIP2.003838_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003838
Chromosome:chromosome 3
Location:8653442
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g209841 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTCCCTAATCGCAGGCGGAGCTGTAAGCTGGAGGGACGTGCAGCTGCG
Internal bar code:TGTCCTACATCCGAGCGCCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:575
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCAAATTCCCTGGCAAG
Suggested primer 2:ATCTCCTCGCTCCACCTCTT