Insertion junction: CLIP2.003843_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003843
Chromosome:chromosome 3
Location:5483504
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184550 LPA3,CPLD28 (1 of 1) PTHR34051:SF2 - PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC; Low Photosystem II Accumulation 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGTGCGCTGGACTGCTTTGCAAGCGCGTACGGGGCATACACGTTAGTAA
Internal bar code:CTGTTTTAGGGATATAAATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3097
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAACGACGGCCTCAAACT
Suggested primer 2:GCATGGGTGTGGGTTGGATA