Insertion junction: CLIP2.003843_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.003843
Chromosome:chromosome 3
Location:5483505
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g184550 LPA3,CPLD28 (1 of 1) PTHR34051:SF2 - PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC; Low Photosystem II Accumulation 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGTACCTGTATGGTCTCCTGATAACCCATATGCTGCCCCCTTCACCC
Internal bar code:AGAGCGGACTAAATTAAGTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3368
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCATGGGTGTGGGTTGGATA
Suggested primer 2:ATCAACGACGGCCTCAAACT