Insertion junction: CLIP2.003850_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.003850
Chromosome:chromosome 3
Location:6298984
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192000 SEC13L,SEH1 COP-II coat subunit, nucleoporin; (1 of 1) K14299 - nucleoporin SEH1 (SEH1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGAGCCGGGCGCATCGCTGGCTGACTGGTGATGATACTGAAAGATACGG
Internal bar code:TTGGGGACCGAAGGGATGACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:928
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGTGAGCCGTCTCGATG
Suggested primer 2:CGATATTGCTGTCCCCACGA