Insertion junction: CLIP2.003854_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003854
Chromosome:chromosome 16
Location:6444104
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g675100 CPLD53 Conserved in the Plant Lineage and Diatoms; (1 of 3) PTHR31319:SF10 - ZINC FINGER PROTEIN CONSTANS-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCTGGTGGCGGCGGTGTGTGGTCATCCTCCAGCAGCTCTTGCAGCTGC
Internal bar code:AATGTCTAAGCCTGAGGCCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:445
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGATTTAGCCATGCGTTGGG
Suggested primer 2:AGCGAATGACCTGTGCATGA