Insertion junction: CLIP2.003856_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003856
Chromosome:chromosome 14
Location:1949581
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g620600 PHC2,FAP202 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCTCGGCGACGGGATAGCCTGCTTGCAACTTGCTGTCAAATCCGGTGG
Internal bar code:TAGCTTAGTTAATATGTCTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1071
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGAACCACCTCTGTGACA
Suggested primer 2:GTGGAGATAGGGCAGCAGTC