Insertion junction: CLIP2.003857_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003857
Chromosome:chromosome 7
Location:731463
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g317601 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAATCAATGCATGGTAAGGGAAGTTAAATTAATGTATGCTTGAGAAGACA
Internal bar code:TTTACAACTAGTTAGGCGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2401
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGAACCCTGTCCCATCAC
Suggested primer 2:TTGTCTATCCTCCTCCGCCA