Insertion junction: CLIP2.003867_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003867
Chromosome:chromosome 7
Location:1890950
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325743 GRX3 (1 of 1) PTHR10293//PTHR10293:SF37 - GLUTAREDOXIN-RELATED PROTEIN // MONOTHIOL GLUTAREDOXIN-S14, CHLOROPLASTIC; Glutaredoxin 3, CGFS type, chloroplastic intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCACACCCCCACCATGGCCCCCCGGCCATCGCCAGAACGCGCCGTGCCT
Internal bar code:ATTACCGACTATATTCTATATG

Confirmation - LEAP-Seq

LEAP-Seq distance:928
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCCCAAAAGAGTTGTGT
Suggested primer 2:TGGCGAGGCTTATTCAACGT