Insertion junction: CLIP2.003868_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003868
Chromosome:chromosome 1
Location:5431362
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038350 (1 of 39) IPR009003 - Peptidase S1, PA clan intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCTGACAATGAGCTCGGCATCCTGGGCGTCCTGATCCATTGCTAGCGG
Internal bar code:GATGAAGCGGATAATATTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:204
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGGCCGCATGCATGTCTA
Suggested primer 2:CGCCCAATTCCAAAGTTGCA