Insertion junction: CLIP2.003872_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003872
Chromosome:chromosome 17
Location:2178602
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g712350 CPLD6 conserved protein related to metal-dependent CAAX amino terminal protease family; (1 of 2) PTHR10794:SF58 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCTGGGTGGCGCTGGAGCGTGGCACGTTGCTTGGGCGGAGGGAAGGCT
Internal bar code:TTAGCTTCCCCACCGCCAATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:5086
LEAP-Seq percent confirming:98.913
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:TAACGCCGGGCTCTTGAATT
Suggested primer 2:AGTCCCATGCATCCACCTTG