Insertion junction: CLIP2.003881_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003881
Chromosome:chromosome 3
Location:143622
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g143947 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAACTACGCTATGTGGGGTGTCTTGATCGCGATGTGCCTGCTGAGCAC
Internal bar code:CGAGCGGTATCTACTTGAGGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3913
LEAP-Seq percent confirming:95.5556
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCTTCAATCTGGACCGC
Suggested primer 2:TCGTGAATGCTTTCTCCCCC