Insertion junction: CLIP2.003885_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003885
Chromosome:chromosome 16
Location:6652838
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673550 CGLD36 (1 of 1) 2.7.1.100//5.3.1.23 - S-methyl-5-thioribose kinase / MTR kinase // S-methyl-5-thioribose-1-phosphate isomerase / S-methyl-5-thio-D-ribose-1-phosphate aldose-ketose-isomerase; 5-methyl thioribose kinase-related protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAACAGGCTGCTGGCCAGGAAGGCCGCCAGGTGGCCGGCCAGGCGGGG
Internal bar code:CACGCCAACCACGTAAGTCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:152
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTACACGGGGAGACGTTTGG
Suggested primer 2:CCGACTCATACGACTGGCTC