Insertion junction: CLIP2.003901_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003901
Chromosome:chromosome 11
Location:1070278
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACTTAGCCCCTGAGCCCAGCTACCAGTGACAACGGAAACCCGAATGCCG
Internal bar code:CGTTCCGGGGTTATGCGACTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:132
LEAP-Seq percent confirming:15.3846
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CACAAGCGATCCTTCCCTGT
Suggested primer 2:GCATTGCTGTTGACCGTGTT