Insertion junction: CLIP2.003906_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003906
Chromosome:chromosome 7
Location:99360
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g312750 CSL4 (1 of 1) K07573 - exosome complex component CSL4 (CSL4, EXOSC1); Exosome component, Csl4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATACTATTTTTTGTGGCACGTGCATGCCGTGCATAAGACGCTGCTCCGC
Internal bar code:CTTACCGTAGATTGATGGCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:485
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGGAGGTGAGACTCTCAT
Suggested primer 2:GCAAATCCCTTCAGAGGCCT