Insertion junction: CLIP2.003917_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003917
Chromosome:chromosome 12
Location:7031922
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g560550 MTF1 (1 of 2) 2.1.2.9 - Methionyl-tRNA formyltransferase / transformylase; Methionyl-tRNA formyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGACAGCCGTACCATGCTGGCGTTGCCATGGCACACCCTGCCTAAGA
Internal bar code:TCCTTATGGTGGATTAATTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1534
LEAP-Seq percent confirming:53.8462
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGTCTTTGACCGCAGCAT
Suggested primer 2:CTGCTGCTACTGCTTCCACT