Insertion junction: CLIP2.003925_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.003925
Chromosome:chromosome 11
Location:2687714
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095073 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGTGATTTTGGTATTGATTCGCCTTACTGGATACAAACGCACATATG
Internal bar code:CTGGTCTTTCGTCCCGGCGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2203
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTCCATTCGACGCATGAC
Suggested primer 2:CGACTTCGTTGACCTGGTCA