Insertion junction: CLIP2.003926_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.003926
Chromosome:chromosome 1
Location:6909188
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049600 CGLD22 (1 of 1) K02116 - ATP synthase protein I (atpI); Assembly factor for chloroplast ATPase outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGACATCACAGGCGCGTTAAGGGCGTGGTGGTCGGTTCGCAAGTGTGT
Internal bar code:ACGATGCGCCAGAAAGGGAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1766
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGTGTCGCCGTTTAGACA
Suggested primer 2:ACAAGCTGGCGGTCATTACA