Insertion junction: CLIP2.003929_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.003929
Chromosome:chromosome 3
Location:2318614
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g157950 (1 of 1) IPR011989//IPR011990//IPR016024 - Armadillo-like helical // Tetratricopeptide-like helical domain // Armadillo-type fold 5'UTR
Cre03.g158000 GSAT,GSA,GSA1 Glutamate-1-semialdehyde aminotransferase; (1 of 1) 5.4.3.8 - Glutamate-1-semialdehyde 2,1-aminomutase / Glutamate-1-semialdehyde aminotransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAAACTTACGAAAGCATGCTCGCAAGTCCTAGCCCGTGTGTCATTTTA
Internal bar code:AGTGAGAATATGAAAAGTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2769
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCGCGAGAATTAAGTGC
Suggested primer 2:CCTACACATGCTGCACAGGA