Insertion junction: CLIP2.003939_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003939
Chromosome:chromosome 7
Location:3520532
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g336250 (1 of 1) K13121 - protein FRA10AC1 (FRA10AC1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCCCGCTTCGAAATAGCTCAGTTCCTTAAGACAGGAGTACCTGCTGCT
Internal bar code:GCGGTAGGAGGCTTTACGGAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1749
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTTGAAGAGCCGGTCAT
Suggested primer 2:GCTGCATGCACTTTTGTCCA