Insertion junction: CLIP2.003944_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003944
Chromosome:chromosome 6
Location:5244880
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g284150 RH2,RHP2 (1 of 2) K06580 - ammonium transporter Rh (SLC42A, RHAG, RHBG, RHCG); Rhesus protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATTCCCTGTGCCGTCTCCGGTTTGCGCCCTCGGTCTCCCGCACCTCTT
Internal bar code:TACAGGTAGATGTCTCCGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3737
LEAP-Seq percent confirming:98.8889
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:GCTACAAACAGCCGCAAACA
Suggested primer 2:GCACACAACTCTACGCCTCT