Insertion junction: CLIP2.003945_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003945
Chromosome:chromosome 7
Location:1103320
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g320450 ELI10,ELIP10,ELIP4 Early light-induced LHC-like protein; (1 of 5) PTHR14154//PTHR14154:SF14 - UPF0041 BRAIN PROTEIN 44-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACAAGCATTGGGTATGCGAAGCCTTGTTGCAAGACTGTGCGTCGCATG
Internal bar code:GGAATCTGATGAGTAACACAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1450
LEAP-Seq percent confirming:69.4444
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAGTGCTCGCCAAAATCG
Suggested primer 2:CAGGTGAGCCAGCTTCTCAA