Insertion junction: CLIP2.003970_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.003970
Chromosome:chromosome 16
Location:2621446
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661250 THB9 (1 of 6) PTHR10681//PTHR10681:SF118 - THIOREDOXIN PEROXIDASE // SUBFAMILY NOT NAMED; Truncated hemoglobin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTTTGTGGTGCACTGGTACACACATACACACGTGGGCGGCAATCCTTT
Internal bar code:ACATGTTTGCTCCTGTGATATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2320
LEAP-Seq percent confirming:91.5254
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCCAATATACTCGGGGC
Suggested primer 2:CGGAATCCTGGTGTGTGGAA