Insertion junction: CLIP2.003971_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003971
Chromosome:chromosome 3
Location:6065013
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g190150 CGL1 (1 of 2) PF11833 - Protein of unknown function (DUF3353) (DUF3353); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAATGAACCGTGGTGATGATGTGCATAGGGAGGAGGGGCTGCCGTGCA
Internal bar code:TGAGGTGTGTGCAACCAAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2813
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TTACCCAGTGACCACGCTTC
Suggested primer 2:CCACTGCGATGCATACAAGC