Insertion junction: CLIP2.003978_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.003978
Chromosome:chromosome 10
Location:2487686
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435850 CPLD24 conserved expressed protein, perhaps chloroplast targetted; (1 of 23) IPR008927 - 6-phosphogluconate dehydrogenase C-terminal domain-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAAGTACAATGACTGCATTACATTTGACGGCACGCTGCAGGCGGTAGTA
Internal bar code:TCGGTTCTTAAAGCATATATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1285
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CGTACGCTCCGATCACGTTA
Suggested primer 2:AGAAGCGAGGCGTGTGTAAA