Insertion junction: CLIP2.003990_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.003990
Chromosome:chromosome 4
Location:384859
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217911 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTGAAGAGACAGAGGCGGTGGTTGCGCAATCGGGGATTCAATCGCAA
Internal bar code:CGCCGTTAACTTATTGTAATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3650
LEAP-Seq percent confirming:82.8947
LEAP-Seq n confirming:63
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:ATGATCGTGACAGGATCCGC
Suggested primer 2:CGGTTGGAACTGGAAGACGA