Insertion junction: CLIP2.003990_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.003990
Chromosome:chromosome 4
Location:384866
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217911 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGGATACGGCTTGATGTGCAATCATCCTGACCTGCATGCATGTGACGT
Internal bar code:CGCCGTTAACTTATTGTAATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:498
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTTGGAACTGGAAGACGA
Suggested primer 2:ATGATCGTGACAGGATCCGC