Insertion junction: CLIP2.003999_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.003999
Chromosome:chromosome 12
Location:4948647
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g524500 RMT2 Putative protein N-methyltransferase; (1 of 2) PTHR13271//PTHR13271:SF30 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGTGCGCGCGCTGCCGTGCATGTGCCAGCCAGATTGCTTAATGGCGG
Internal bar code:ACGCTTGGTAACGCGGCTTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:399
LEAP-Seq percent confirming:78.0488
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACAGCCACAGTCACAA
Suggested primer 2:TGAGAATCTGGCCGTGACAC