Insertion junction: CLIP2.004005_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004005
Chromosome:chromosome 16
Location:5248513
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684250 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGTGCAAGTGAGTCATACACGCATTGTCCGAGGTGTTGGTGTTGAGT
Internal bar code:TTTCCGAACTGAATCCAAAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2699
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGTGTACGGTTGTTGGC
Suggested primer 2:AGAAGGCGCAGTACACTGAC