Insertion junction: CLIP2.004006_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.004006
Chromosome:chromosome 6
Location:2647941
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270300 (1 of 1) PTHR13271//PTHR13271:SF36 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED 5'UTR
Cre06.g270350 AMYB2,AMB2 Beta-amylase 2; (1 of 3) 3.2.1.2 - Beta-amylase / Saccharogen amylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAAAAGTTCAAGTGTCATCCACTGGTTGGAGGGGCCGCGGCACGACTT
Internal bar code:TTGCGAATTTCCGGCAATGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2189
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGGCAATCGCAATCAAGG
Suggested primer 2:TGCATGTCCTCCTCAAGCAG